Table 5.
The percentage of the 50 data sets under each demographic scenario for which, when the causal SNP is excluded, at least one of the nine other SNPs in gene 1 is significantly associated with disease
|
|
Power (%): Causal SNP excluded |
||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| FST/struct |
CHISQ |
GC |
SLR |
BLR |
STR2 |
AM2 |
|||||
| (1) No structure | 86 | 82 | 84 | 84 | 62 | 84 | |||||
| (2) Low/eq | 88 | 84 | 94 | 88 | 62 | 86 | |||||
| (3) High/eq | 76 | 60 | 68 | 72 | 58 | 68 | |||||
| (4) Low/un | 74 | 68 | 72 | 72 | 72 | 72 | |||||
| (5) High/un | 70 | 60 | 68 | 66 | 66 | 66 | |||||
| Average (SE)
|
79 (2.8)
|
71 (3.1)
|
77 (2.9)
|
76 (2.9)
|
64 (3.4)
|
75 (3.0)
|
|||||
-
The final row gives the mean over the first five rows, and its standard error (SE).
