Design optimization methods for genomic DNA tiling arrays

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Figure 4.
Figure 4.

(A) Graphical representation of repetitive and non-repetitive segments in repeat-masked DNA. (B) In the naive tiling case, many small non-repetitive regions might be lost (yellow). (C) These can be recovered by using partitioning methods that generate an optimal tile path over the sequence.

This Article

  1. Published in Advance December 19, 2005, doi: 10.1101/gr.4452906 Genome Res. 16: 271-281

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