Identification of transposable elements using multiple alignments of related genomes

Table 4.

Contribution of family type to elements on the chromosome arms



LTR

LINE-like

TIR

FB
Chr
New
BDGP
New
BDGP
New
BDGP
New
BDGP
X 9.7 8.7 7.0 4.6 1.8 3.6 0.2 0.8
2L 8.3 8.4 5.6 6.5 1.8 4.4 0.4 0.3
2R 9.0 8.7 9.0 7.2 2.8 4.0 0.2 0.1
3L 17.4 7.8 8.3 7.0 4.2 3.8 0 0.5
3R 5.8 8.2 1.9 4.7 1.8 3.7 0 0.3
4
1.6
0.7
2.3
1.9
1.1
3.9
0
0.1
  • For each family type, the first column shows the percentage of new findings of known TE families, and the second column displays the percentage in BDGPTrans.

This Article

  1. Genome Res. 16: 260-270

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