Identification of transposable elements using multiple alignments of related genomes

Table 2.

Summary of presence of BDGP annotations in alignment, and in our RIR findings in D. melanogaster R4


Chr arm

BDGPTrans

Not in alignment

NOT in RIR (false negative)

In RIR (true positive)
X 276 8 52 216
2L 305 16 62 227
2R 312 3 52 257
3L 288 13 65 210
3R 288 5 64 219
4
102
21
33
48

This Article

  1. Genome Res. 16: 260-270

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