Table 1.
L1 Integration with respect to genomic landmarks
|
Genomic feature |
Frequency of insertions (%) |
Frequency in genome (%) |
P-value |
|---|---|---|---|
| Gene annotations | |||
| RefSeq | 14.6 | 26.8 | 0.040 |
| “known gene” | 14.6 | 26.5 | 0.044 |
| MGC | 12.5 | 18.3 | 0.197 |
| Genscan | 66.7 | 66.6 | 0.562 |
| Repeats | 33.3 | 39.8 | 0.210 |
| LINE | 21.6 | 18.9 | 0.379 |
| SINE | 5.9 | 10.3 | 0.210 |
| LTR | 5.9 | 14.0 | 0.070 |
| CpG Islands | |||
| ± 1 kb | 0.0 | 1.5 | 0.390 |
| ± 25 kb
|
14.6
|
20.4
|
0.204
|
