Table 4.
Evolution of miscellaneous splicing regulatory proteins
|
Family |
Human |
Mouse |
Rat |
Chicken |
Fugu |
Zebrafish |
Tetraodon |
Ciona |
Fly |
Mosquito |
C. elegans |
Arabidopsis |
S. pombe |
S. cerevisiae |
Plasmodium |
T. cruzi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CLK | CLK1 | CLK1 | CLK1 | CLK2 | CLK2a | CLK2 | CLK2a | CLK | CLK | CLK | CLK | CLK | CLK | CLK | CLK | CLKa |
| CLK2 | CLK2 | CLK2 | CLK3 | CLK2b | CLK4 | CLK2b | AFC1 | CLKb | ||||||||
| CLK3 | CLK3 | CLK3 | CLK4 | CLK4 | CLK4 | AFC2 | ||||||||||
| CLK4 | CLK4 | CLK4 | AFC3 | |||||||||||||
| CUG | CUG1 | CUG1 | CUG1 | CUG1 | CUG1 | CUG1 | CUG2a | CUG1 | CUGa | CUGa | CUG | RBPa | ||||
| CUG2 | CUG2 | CUG2 | CUG2 | CUG2a | CUG2 | CUG2b | ETR3 | CUGb | CUGb | RBPb | ||||||
| CUG3 | CUG3 | CUG3 | CUG3 | CUG2b | CUG3 | CUG3a | ||||||||||
| CUG4 | CUG4 | CUG4 | CUG4 | CUG3a | CUG4 | CUG3b | ||||||||||
| CUG5 | CUG5 | CUG5 | CUG5 | CUG3b | CUG5 | CUG4 | ||||||||||
| CUG6 | CUG6 | CUG6 | CUG6 | CUG4 | CUG5 | |||||||||||
| CUG5 | ||||||||||||||||
| ELAV | ELAV1 | ELAV1 | ELAV1 | ELAV1 | ELV1a | ELV1a | ELAV1 | ELAVa | ELAVa | ELAVa | ELAV | |||||
| ELAV2 | ELAV2 | ELAV2 | ELAV3 | ELV1b | ELV1b | ELAV2 | ELAVb | ELAVb | ELAVb | |||||||
| ELAV3 | ELAV3 | ELAV3 | ELAV4 | ELAV3 | ELAV2 | ELAV3 | ELAVc | ELAVc | ||||||||
| ELAV4 | ELAV4 | ELAV4 | ELAV4 | ELAV3 | ELAV4 | |||||||||||
| ELAV | ELAV4 | |||||||||||||||
| ELAV | ||||||||||||||||
| FUSE | FUSE1 | FUSE1 | FUSE2 | FUSE1 | FUSE1 | FUSE1 | FUSE1 | FUSE | PSI | PSI | FUSEa | KHa | ||||
| FUSE2 | FUSE2 | FUSE3 | FUSE2 | FUSE2 | FUS2a | FUSE2 | FUSEb | KHb | ||||||||
| FUSE3 | FUSE3 | FUSE3 | FUSE3 | FUS2b | FUS3a | FUSEc | KHc | |||||||||
| FUSE3 | FUS3b | FUSEd | ||||||||||||||
| FUSEe | ||||||||||||||||
| SRPK | MSSK1 | MSSK1 | MSSK1 | SRPK1 | MSSK1 | MSSK1 | SRK1a | SRPK | SRPK | SRPK | SRPK | MSSKa | SRPK | SRPK | SRPK | SRPK |
| SRPK1 | SRPK1 | SRPK1 | SRPK2 | SRPK1 | SRK1a | SRK1b | MSSKb | |||||||||
| SRPK2 | SRPK2 | SRPK2 | SRPK | SRPK2 | SRK1b | SRK1c | MSSKc | |||||||||
| SRPKa | SRPK2 | SRPK2 | SRPKa | |||||||||||||
| SRPKb | SRPKa | SRPKa | SRPKb | |||||||||||||
| SRPKb | SRPKb | |||||||||||||||
|
|
|
|
|
|
|
SRPKc
|
SRPKc
|
|
|
|
|
|
|
|
|
|
-
Detailed identification of each gene is provided in Table S2. Small termination characters identify species/phylum specific duplications.
