Transcription-mediated gene fusion in the human genome

Table 1.

Human transcription-induced chimeras described in the literature


Gene 1a

Gene 2b

Evidence of ESTsc

Full CDS cDNA depositedd

Reference
MDS1 EVI1 AF164154 (Fears et al. 1996)
GALT IL11Ra 1 No (Magrangeas et al. 1998)
CCL14 CCL15 3 NM_004167 (Pardigol et al. 1998)
HHLA1 OC-90 No (Kowalski et al. 1999)
CYP2C18 CYP2C19 L07093 (Zaphiropoulos 1999)
SBLF ALF 1 NM_172311 (Upadhyaya et al. 1999)
TSNAX (TRAX) DISC1 No (Millar et al. 2000)
Kua UBE2V1 (UEV1A) NM_199203 (Thomson et al. 2000)
PPAN (SSF1) P2RY11 No (Communi et al. 2001)
VPS72 (YL-1) TMOD4 1 No (Cox et al. 2001)
TNFSF12 (TWEAK) TNFSF13 (APRIL) NM_172089 (Pradet-Balade et al. 2002)
LY75 (CD205) CD302 (DCL1) AY184222 (Kato et al. 2003)
ANKHD1 (MASK)
EIF4EBP3 (BP3)
13
NM_020690
(Poulin et al. 2003)
  • a The upstream gene in the fused transcript. Additional nomenclature is in parentheses

  • b The downstream gene

  • c Number of supporting ESTs in our set

  • d GenBank sequences with full CDS annotation, which represent the fusion transcripts

This Article

  1. Genome Res. 16: 30-36

Preprint Server