The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza

Table 3B.

Genome coverage estimations for four Oryza species based on hybridization and contig analysis (see Methods for details)
Genome
CC
 CCDD
 GG
 HHJJ
O. officinalis
 O. alta
 O. granulata
 O. ridleyi
Number of hits 168 116 90 76 139 86
Number of loci 12 11 9 12 12 10
HX coveragea 14 10.5
10
6.3 11.6
8.6
10.3b 10.2b
BAC library coveragec
18.6
12.1
10.8
12.5

  • ↵a HX coverage

  • ↵b average HX coverage are as described for Table 3A, except that these values are obtained from specific FPC and BES assemblies as small projects (see Methods for details)

  • ↵c Calculated genome coverage estimations from Table 2

This Article

  1. Published in Advance December 12, 2005, doi: 10.1101/gr.3766306 Genome Res. 16: 140-147

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