Table 1.
Statistics of rice chromosome 3
|
Feature |
Statistic |
|---|---|
| Total number of BACs/PACs | 323 |
| Total BAC length (Mb) | 44.6 |
| Total nonoverlapping sequence (Mb) | 36.1 |
| Short arm (Mb) | 19.4 |
| Long arm (Mb) | 16.7 |
| Integrated genetic markers | 339 (loci) |
| G+C content | |
| Overall | 43.7 |
| Exons | 54.4 |
| Introns | 38.5 |
| Intergenic regions | 41.5 |
| Total number of genesa | 5915 (5002) |
| Known/putative genes | 3064 (51.8%) |
| Expressed genes | 757 (12.8%) |
| Hypothetical genes | 2094 (35.4%) |
| Gene density (kb)b | 6.1 (7.2) |
| Average gene length (bp)c | 2567 |
| Total number of gene models | 6232 |
| Average exon size (bp) | 281 |
| Average intron size (bp) | 369 |
| Average number exons per gene model
|
4.5
|
-
↵a Total number of genes includes the 913 TE-related genes and the 5002 non-TE-related genes.
-
↵b Gene density is reported for all genes and non-TE-related genes (in parentheses).
-
↵c Average length of the genes is determined using the length from the start codon to the stop codon of the longest isoform for all gene models.
