A microarray analysis of the rice transcriptome and its comparison to Arabidopsis

Table 3.

The total number of gene models identified as being within a coexpression chromosomal region, with genes ordered in their native chromosomal locations (ordered genes) compared with the situation where all genes are randomized in their relative positions (randomized genes), at various significance levels


Significance (P-value)

Ordered gene models

Randomized gene models
0.001 558 95
0.005 1981 695
0.01
3324
1350
  • Calculation of the chromosomal regions is based on a recently reported method (Spellman and Rubin 2002) with a chromosomal region window size of 11 gene models and is detailed in Supplemental Table 6.

This Article

  1. Genome Res. 15: 1274-1283

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