A microarray analysis of the rice transcriptome and its comparison to Arabidopsis

Table 2.

The correlation of expression for different functional categories of rice and Arabidopsis best-matched gene model pairs from corresponding organs


Arabidopsis/Rice

Seedling/seedling

Cauline leaf/shoot

Root/root

Flower/heading stage panicle

Silique/filling stage panicle
Transcription factor 0.134a 0.197 0.141 0.077 0.076
(0.006)b (5.3E-05) (0.004) (0.118) (0.123)
Proteasome pathway 0.259 0.321 0.240 0.285 0.165
(1.7E-5) (7.3E-8) (6.8E-5) (1.97E-6) (6.0E-4)
Protein synthesis pathway 0.024 0.067 0.223 0.049 0.098
(0.736) (0.345) (0.02) (0.494) (0.172)
Signal transduction 0.168 0.213 0.202 0.251 0.180

(0.03)
(0.001)
(0.0002)
(5.1E-6)
(0.01)
  • aCorrelation coefficient; bt-test significance P-value.

This Article

  1. Genome Res. 15: 1274-1283

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