Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays

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Figure 4.
Figure 4.

Different classes of novel intronic transfrags revealed by RACE/array. (A) A novel transfrag (shown by an arrow) within RIKEN cDNA FLJ20337 (top strand, Chromosome 6) represents a novel exon of this gene, as evidenced by the 3′-RACE/array profile and sequences of two different RT-PCR products. (B) Several novel intronic transfrags represent a bottom-strand transcript antisense to the UPB1 gene (top strand, Chromosome 22), as evidenced by 5′- and 3′-RACE/array analyses. (C) Intronic transfrags within the LIF gene (bottom strand, Chromosome 22) represent internal sense transcripts as evidenced by 5′- and 3′-RACE/array analysis. Approximate positions of the 5′- and 3′-ends of the transcripts on the bottom strand in panels B and C are indicated as “5′b” and “3′b.”

This Article

  1. Genome Res. 15: 987-997

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