Table 1.
Homologs of imprinted gene candidates showing linkage to human conditions
|
Condition |
Chromosome |
Locus |
Coordinate |
Expressiona,b |
Linkage |
Reference |
|---|---|---|---|---|---|---|
| Alzheimer | 10p11 | D10S1208 | 35.3 | m | linkage to late-onset Alzheimer disease (AD)b | Bassett et al. (2002) |
| Epc1 | 32.6 | M | ||||
| C1 orf9 | 35.7 | M | ||||
| Atopy | 13q14 | D13S161 | 46.7 | p | linkage to atopyb | Bhattacharyya et al. (2000) |
| LCP1 | 45.6 | P | ||||
| Autism | 9p22 | D9S157 | 17.6 | p | linkage to autismb | Lamb et al. (2005) |
| C9orf39 | 17.1 | P | ||||
| Bipolar | 13q13 | D13S1493 | 32.9 | m | linkage to bipolar disorderb | McInnis et al. (2003) |
| Q5TBK1 | 31.9 | M | ||||
| 18q22 | D18S878 | 61.6 | p | linkage to bipolar disorderb | McInnis et al. (2003) | |
| SERPINB2 | 59.7 | M | ||||
| Diabetes | 11q13-14 | D11S2371-D11S2002 | 73.2-79.6 | p | linkage to birth weight (indirectly to diabetes)b | Lindsay et al. (2002) |
| NEU3 | 74.4 | M | mice overexpressing Neu3 develop diabetic phenotype | Sasaki et al. (2003) | ||
| OR2AT4 | 74.5 | M | ||||
| CAPN5 | 76.5 | M | ||||
| Homosexuality | 10q26 | D10S217 | 129.4 | m | linkage to male sexual orientationb | Mustanski et al. (2005) |
| C10orf90 | 128.1 | P | ||||
| STK32C | 133.9 | M | ||||
| NKX6-2 | 134.4 | M | ||||
| Obesity | 10p12 | D10S197 | 26.5 | m | linkage to obesityb | Dong et al. (2005) |
| GAD2 | 26.5 | M | candidate gene for obesity | Boutin et al. (2003) | ||
| Paternal UPD | 14q12 | D14S608 | 27.9 | paternal UPD results in fetal malformationsb | Kurosawa et al. (2002) | |
| NOVA1 | 26.0 | M | ||||
| FOXG13 | 28.3 | P | ||||
| Schizophrenia | 2p12 | D2S139 | 76.7 | p | linkage to relative hand skillb, Tourette syndrome and schizophrenia | Francks et al. (2003); Simonic et al. (2001); DeLisi et al. (2002) |
| LOXL3 | 74.7 | M | ||||
| DOK1 | 74.7 | P | ||||
| HK2 | 75.0 | M | ||||
| TACR1 | 75.2 | P | ||||
| 22q12 | D22S283 | 35.1 | m | linkage to schizophreniab | DeLisi et al. (2002) | |
| Q96PY3 | 36.1 | P | ||||
| C22orf23 | 36.7 | M | ||||
| Thrombosis | 5q13 | D5S2003 | 74.6 | m | linkage to high FVIII levelsb | Berger et al. (2005) |
| Q9P109 | 74.4 | M | ||||
| 9q22 | D9S910 | 98.6 | p | linkage to high FVIII levelsb | Berger et al. (2005) | |
| SAMD6 | 98.6 | P | ||||
| ALG2 | 99.1 | M | ||||
| NR4A3 | 99.7 | P | ||||
| TXNDC4 | 99.8 | P | ||||
| 11q21 | D11S4176 | 93.7 | m | linkage to high FVIII levelsb | Berger et al. (2005) | |
|
|
|
JMJD2D
|
94.4
|
M
|
|
|
-
Assignment of cytogenetic band and coordinates (in megabases) is based on Ensembl version 29.35b.
-
↵a Genes predicted to be expressed from the maternal allele are denoted by M, paternally expressed genes by P.
-
↵b Parent-of-origin effect was observed (m and p denote maternal and paternal effects, respectively).











