Identification of genomic features using microsyntenies of domains: Domain teams

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Figure 5.
Figure 5.

An example of a team (δ = 3) found in four bacteria. This team corresponds to the “superoperon” yjeFE-amiB-mutL-miaA-hfq-hflXKC in the RegulonDB database, from b4167 to b4175 in E. coli. The conserved team thus extends beyond this operon. Some proteins do not contain a Pfam label (arrowheads). However, DomainTeams could retrieve the entire operon (and more) because these proteins are considered as insertions. The proteins are labeled by the “ordered locus name” of their genes.

This Article

  1. Genome Res. 15: 867-874

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