Expression profiles for the genes containing the three binding sites RAP1, SWI5, and MCM1′. The rule linking these binding sites to the expression profiles shown was induced from five expression data sets (i.e., all except pheromone). Each set of graphs is labeled with the expression condition set and with the list of genes for which expression profiles were available. Table 1 lists all eight genes with Gene Ontology annotations and transcription factor bindings. Each graph shows how the expression level of one gene varies over different measurement points. In A, B, and C, these measurement points correspond to time points, while in D and E, they also correspond to other relevant conditions: see individual publications for details. The central genes (i.e., genes for which a rule was induced) are underlined. Genes that did not satisfy the similarity criterion are written in parentheses, and their expression profiles are plotted with a dashed line.
