Discovering functional transcription-factor combinations in the human cell cycle

Table 3.

Genes containing the NF-Y-CDE-CHR combination in their 1-kb promoter sequences


UniGene ID

Gene name

Gene description

Phase assignmenta
Hs.656 CDC25C Cell division cycle 25C G2
Hs.334562 CDC2 Cell division cycle 2, G1 to S and G2 to M G2/M
Hs.85137 CCNA2 Cyclin A2 G2
Hs.77597 PLK Polo-like kinase (Drosophila) G2/M
Hs.180655 STK12 Serine/threonine kinase 12 G2
Hs.120996 STK17B Serine/threonine kinase 17b (apoptosis-inducing) G2
Hs.14870 MGC14386 Similar to cyclin-E binding protein 1 (H. sapiens) G2
Hs.348669 CKS1 CDC28 protein kinase 1 G2/M
Hs.83758 CKS2 CDC28 protein kinase 2 G2/M
Hs.77204 CENPF Centromere protein F (350/400 kD, mitosin) G2/M
Hs.3104 KIAA0042 KIAA0042 gene product G2/M
Hs.86211 FLJ10156 Hypothetical protein G2/M
Hs.30114 MGC2577 Hypothetical protein MGC2577 G2/M
Hs.37035 HLXB9 Homeo box HB9 G1/S
Hs.179526 TXNIP Thioredoxin interacting protein
Hs.144505 DKFZP566F0546 DKFZP566F0546 protein
Hs.174795
RA-GEF-2
Rap guanine nucleotide exchange factor

  • a The cell cycle phase assignment (if applicable) were obtained from Whitfield et al. (2002).

This Article

  1. Genome Res. 15: 848-855

Preprint Server