Identification of functional transcription factor binding sites using closely related Saccharomyces species

Table 1.

Median substitution rates in coding and noncoding DNA
Substitution rate
Lineage
 dSa
 dNb
 dIc
 dN/dS
 dI/dS
S. cerevisiae 0.23 0.02 0.12 0.07 0.52
S. paradoxus 0.13 0.01 0.08 0.09 0.59
S. mikatae 0.46 0.04 0.27 0.08 0.58
Three species
0.83
0.07
0.47
0.08
0.57

  • ↵a Synonymous substitution rate.

  • ↵b Nonsynonymous substitution rate.

  • ↵c Intergenic substitution rate.

This Article

  1. Published in Advance April 18, 2005, doi: 10.1101/gr.3578205 Genome Res. 15: 701-709

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