Table 2.
Accuracy of TWINSCAN predictions with the commonly used geometric intron length distributions versus the smoothed empirical length distribution
|
|
Gene sensitivity |
Overlap gene specificity |
Exon sensitivity |
Overlap exon specificity |
|---|---|---|---|---|
| Geometric intron length | 55.3% | 53.3% | 85.3% | 77.6% |
| Empirical intron length
|
60.0%
|
58.1%
|
86.7%
|
79.5%
|
-
Both results use briggsae alignments and allow GC splice donors.
