ECgene: Genome-based EST clustering and gene modeling for alternative splicing

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Figure 1.
Figure 1.

Flowchart of the ECgene algorithm. The primary cluster is a collection of spliced sequences sharing at least one splice site. The alternatively spliced clusters are subclusters of a primary cluster obtained from graph-theoretic analysis of exon connectivity. Unspliced ESTs are added to produce the final ECgene gene models, which are classified into three groups according to the transcript reliability.

This Article

  1. Genome Res. 15: 566-576

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