Functional insights from the distribution and role of homopeptide repeat-containing proteins

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Figure 6.
Figure 6.

Multiple sequence alignment of the ribosomal protein L10. A multiple alignment of the glutamic acid-rich region in L10 from the following prokaryote species: Halobacterium sp. NRC-1, Haloarcula marismortui, Haloferax volcanii, Sulfolobus solfataricus, M. vannielii, Methanosarcina acetivorans str. C2A, M. kandleri AV19, M. thermautotrophicus str. Delta H, Archaeoglobus fulgidus DSM 4304, P. abyssi, and the eukaryote species H. sapiens, R. norvegicus, D. rerio, A. gambiae str. PEST, C. elegans, P. falciparum. The boxed region from positions 52–117 highlights the acidic tail. Since no obvious alignment could be built of this region, the sequences were flushed left. The regions to the left and right of the boxed region was aligned with T-COFFEE (Notredame et al. 2000) and then manually adjusted. The final figure was generated with ALSCRIPT (Barton 1993).

This Article

  1. Genome Res. 15: 537-551

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