Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana

Table 2.

Analysis of transcripts from CCURs




Total PCR products

Match A.T. 4.0

Match EST

Match O. sativa sequences

Average CCUR size
Spliced Transcripts 7 6 (86%) 6 (86%) 5 (71%) 1003 bp
Nonspliced Transcripts 18 5 (28%) 5 (28%) 11 (61%) 518 bp
Total
25
11 (44%)
11 (44%)
16 (64%)
654 bp

This Article

  1. Genome Res. 15: 496-504

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