Table 1.
P-values for structural proteomes
|
Organism Name |
Probability |
|---|---|
| Agrobacterium tumefaciens C58 | 6.74E-12 |
| Agrobacterium tumefaciens C58 UWash | 9.51E-12 |
| Aquifex aeolicus | 5.21E-04 |
| Archaeoglobus fulgidus | 3.81E-05 |
| Bacillus halodurans | 1.07E-11 |
| Bacillus subtilis | 2.78E-14 |
| Brucella melitensis | 4.13E-06 |
| Campylobacter jejuni | 3.33E-03 |
| Caulobacter crescentus | 1.06E-10 |
| Clostridium acetobutylicum | 3.18E-12 |
| Clostridium perfringens | 1.55E-04 |
| Corynebacterium glutamicum | 1.74E-11 |
| Deinococcus radiodurans | 4.14E-10 |
| Escherichia coli K12 | 4.59E-11 |
| Escherichia coli O157H7 EDL933 | 8.24E-10 |
| Escherichia coli O157H7 | 9.96E-10 |
| Fusobacterium nucleatum | 9.23E-04 |
| Haemophilus influenzae | 7.46E-05 |
| Halobacterium sp. | 7.41E-06 |
| Helicobacter pylori 26695 | 5.55E-03 |
| Helicobacter pylori j99 | 2.56E-03 |
| Lactococcus lactis | 3.44E-13 |
| Listeria innocua | 1.23E-13 |
| Listeria monocytogenes | 8.37E-12 |
| Mesorhizobium loti | 7.80E-11 |
| Methanosarcina acetivorans | 1.63E-05 |
| Methanosarcina mazei | 6.36E-05 |
| Mycobacterium leprae | 3.88E-04 |
| Mycobacterium tuberculosis CDC1551 | 1.75E-07 |
| Mycobacterium tuberculosis H37Rv | 4.62E-08 |
| Neisseria meningitidis MC58 | 7.49E-04 |
| Neisseria meningitidis Z2491 | 9.79E-04 |
| Nostoc sp. | 2.10E-13 |
| Pasteurella multocida | 5.27E-05 |
| Pseudomonas aeruginosa | 7.41E-06 |
| Pyrococcus furiousus | 5.22E-08 |
| Ralstonia solanacearum | 1.14E-08 |
| Salmonella typhimurium LT2 | 4.19E-10 |
| Salmonella typhi | 1.01E-08 |
| Sinorhizobium meliloti | 1.24E-10 |
| Staphylococcus aureus Mu50 | 8.67E-07 |
| Staphylococcus aureus MW2 | 8.18E-07 |
| Staphylococcus aureus N315 | 9.73E-07 |
| Streptococcus pneumoniae R6 | 1.09E-09 |
| Streptococcus pneumoniae TIGR4 | 1.43E-08 |
| Streptococcus pyogenes MGAS8232 | 4.27E-05 |
| Streptococcus pyogenes | 2.13E-05 |
| Streptomyces coelicolor | 5.80E-17 |
| Sulfolobus tokodaii | 1.34E-05 |
| Synechocystis PCC6803 | 1.10E-04 |
| Thermoanaerobacter tengcongensis | 7.11E-12 |
| Thermoplasma acidophilum | 1.86E-11 |
| Thermoplasma volcanium | 2.66E-12 |
| Thermotoga maritima | 2.16E-13 |
| Vibrio cholerae | 7.24E-08 |
| Xanthomonas campestris | 6.68E-16 |
| Xanthomonas citri | 1.55E-15 |
| Xylella fastidiosa | 4.51E-20 |
| Yersinia pestis
|
4.79E-06
|
-
This table contains the probability that each structural proteome used in this work is a random subgraph of the PDUG. The probabilities are calculated according to the method of Deeds et al. (2004) as described in the Methods section.
