Naturally occurring antisense: Transcriptional leakage or real overlap?

Table 1.

Conservation of gene order and orlentation between human and Fugu


Human pairs classificationa

Consecutive pairs in humanb

Pairs with human-Fugu linkagec

Percent conserved pairsd
Antisense 236 55 23.3%
Same-strand 1257 170 13.5%
Total
2737
453
16.3%
  • a Classification of groups of gene-pairs. Antisense, pairs for which a sense-antisense relationship was observed in human cDNAs and ESTs. Same-strand, pairs of consecutive genes that are on the same strand and are therefore unable to possess sense-antisense relationship.

  • b Pairs of human genes that are consecutive on the human genome and have orthologs in the Fugu genome.

  • c Pairs of consecutive orthologous genes that preserved their gene order and orientation in human and Fugu.

  • d Percentage of linked pairs.

This Article

  1. Genome Res. 15: 364-368

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