Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes

Table 3.

Gains and losses of cellular functions in T. kodakaraensis when compared to Pyrococcus spp.


Gains
Improved α-polysaccharide degradationa
Chitin degradationa
Additional pyruvate oxidation
Tyr biosynthesis
His biosynthesisa
Riboflavin biosynthesisa
Deoxyribose metabolism
Thymidine salvage
Additional cation transporters (Fe2+, Fe3+, Mo2+, K+, Na+)
Improved stress response system (especially for cold adaptation?)
Losses
Ile, Val, and Leu biosynthesisb
Thlamine biosynthesis (partially)
Others
Distinct restriction system
  • a Present in T. kodakaraensis and P. furiosus, and not in P. abyssl and P. horikoshii.

  • b Present in P. abyssi and P. furiosus, and not in T. kodakaraensis and P. horikoshii.

This Article

  1. Genome Res. 15: 352-363

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