Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen

Table 3.

Proteins predicted to have potential TAT signal peptides


PAID

Gene

Protein

Sequencec
a. Proteins predicted to contain a TAT signal peptide
PA0144a hypothetical protein MSRSNGSSSRRTFLR
PA1601a probable aldehyde dehydrogenase MSLANPSRRGFLK
PA2065a pcoA copper resistance protein A precursor MHRTSRRTFVK
PA2328b hypothetical protein MCLDDPTHSRRDILK
PA2394a pvdN PvdN MNDRRTFLK
PA3319a plcN non-hemolytic phospholipase C precursor MISKSRRSFIR
PA3493b conserved hypothetical protein MDAATRRSMLR
PA3713b hypothetical protein MTISRRDFLN
PA4160 fepD ferric enterobactin transport protein FepD MQASPMRRRRLR
PA4431b probable iron-sulfur protein MSNDGVNAGRRRFLV
PA4621a probable oxidoreductase MSNRDISRRAFLO
PA4650 hypothetical protein MPMSSRRLFLS
PA4712 hypothetical protein MRRFSLR
PA4812a fdnG formate dehydrogenase-O, major subunit MDMNRROFFK
PA4858b conserved hypothetical protein MKRRSLLK
b. Additional putative TAT substrates
PA0205b probable permease of ABC transporter MHPIPSPGAALQRROALR
PA1880a probable oxidoreductase MNSKIDLSNALPGSRRGFLK
PA2195 hcnC hydrogen cyanide synthase HcnC MNRTYDIVIAGGGVIGASCAYQLSRRGNLR
PA2378a probable aldehyde dehydrogenase MKRSYPDDLVIGNLSRRGFLK
PA3377 conserved hypothetical protein MSLSPQASAAPEQGYNFAYLDEQTKRMIRRGLLK
PA3392a nosZ nitrous-oxide reductase precursor MSDDTKSPHEETHGLNRRGFLG
PA3750 hypothetical protein MRRLATLAWWAAALPLLPLAVPLAIRTRRRALR
PA3825b hypothetical protein MPIPVKRARRKALR
PA4608 hypothetical protein MSDQHDERRRFHR
PA4882 hypothetical protein MKGPEKKRAKIAIDPSSERQMVDLQRRLLLR
PA5280 sss site-specific recombinase Sss MRADLDAFLEHLRSERQVSAHTLDGYRRDLLK
PA5354
glcE
glycolate oxidase subunit GlcE
MSQPYFDPDAGADHAGALLERVRDALARRAPLR
  • a Reported in Ochsner et al. (2002).

  • b Reported in Dilks et al. (2003).

  • c The bold and underlined sequences identify the putative TAT motif as described in Figure 1C.

This Article

  1. Genome Res. 15: 321-329

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