Making connections between novel transcription factors and their DNA motifs

Table 2.

Probability increase for true TF-DNA motif pairs using different combinations of information


Type of information

Average P_true/P_avg
No information 1
FMC 2.48
PC 1.33
Dmin 2.74
FMC-Dmin 5.38
FMC-PC 3.21
PC-Dmin 3.49
FMC-PC-Dmin
6.48
  • Probabilities calculated using the study set of TFs and their DNA motifs. P_true: the probability of the true TF-DNA motif pair. P_avg: the average probabilities of all TF-DNA motif pairs for a given TF.

This Article

  1. Genome Res. 15: 312-320

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