Gene conversion and evolution of Xq28 duplicons involved in recurring inversions causing severe hemophilia A

Table 3.

Divergence between int22h repeats of humans and chimpanzee


Int22h residue

8

49

193

459

472

683

742

1113

1319

1437

1450

1602

1701

2086

2133

2170

2478

2520

2798

2820

2834

3156

3223

3546

3777

3867

4094

4098

4099

4157

4178

4247

4257

4302

4303

4331

4340

4350

4353

4360

4364

4378

4414

4610

4612

4640

4759

4769

4776

4827

4859

4860

4869

4870

4943

5040

5076

5150

5259

5346

5431

5470

5640

5674

5725

5748

5785

5845

5876

5880

5909

5971

6017

6083

6157

6233

6275

6373

6420

6428

6456

6499

6565

6685

6702

6718

6976

7145

7192

7245

7278

7411

7609

7638

7652

7667

7733

7765

7779

7830

8579

8726

8731

8742

8746

8854

9085

9217

9243

9479

9502

9503
Human h-1 G T T a G C T T G A G A T G T T A A A C T C A G G T a G G C T G T C G C a C C C G G A C G G G C G T C A G A A T g G C C C A C C A A C G C A A G G G G C T C C C C A C G G T C C G C C G G T a A A A C C A T C C A A C G G T A C
Human h-2 + 3 G c T G G C T T G A G A T G T T A A A C T C A G G T G G G C T G T g G C G C C C G G A C G G G C G T C A G A A T A G C C C A C C A A C G C A A G G G G C T C C C C A C G G T C C G C C G G T G A A A C C A T C C A A C G G T A C
Chimp h-1 a T T G a A C C T G T C C C C G G G C T C T G A A C G T A G G A C C T T G T g T c C G G C A A G T C G G A G G G A C T G T G T T G G G C G G G T T A A G C T G G T G T A A G T T c A C T A T G G T T t t g g t C A A G G t T g t
Chimp h-2 + 3
G
T
c
G
G
A
C
C
T
G
T
C
C
C
C
G
G
G
C
T
C
T
G
A
A
C
G
T
A
G
G
A
C
C
T
T
G
T
t
T
G
C
G
G
C
A
A
G
T
C
G
G
A
G
G
G
A
C
T
G
T
G
T
T
G
G
G
C
G
G
G
T
T
A
A
G
C
T
G
G
T
G
T
A
A
G
T
T
G
A
t
T
A
c
G
G
T
T
C
C
A
T
C
t
g
g
G
c
G
c
A
C
  • Int22h residue number is shown on top. Base divergences representing co-doubles are highlighted gray while singles and doubles are in bold lower case. Base difference between human int22h-2 (C) and int22h-3 (T) at residue 4350 is indicated by showing the C of int22h-2 in bold uppercase.

This Article

  1. Genome Res. 15: 214-223

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