Table 3.
QTL characterization
|
PC |
Marker associated with QTL |
Chromosome |
Location bp |
BLUP R2 |
P-value |
|---|---|---|---|---|---|
| 2 | FH2656 | X | 60,748,537 | 0.028 | 0.0013 |
| 2 | FH3324 | CFA12 | 3,999,454 | 0.055 | 0.0027 |
| 2 | FH2269 | CFA30 | 14,820,034 | 0.015 | 0.0025 |
| 2 | FH2189 | CFA31 | 2,000,000 | 0.027 | 0.0337 |
| 4 | FH2431 | CFA2 | 8,860,467 | 0.069 | 0.0128 |
| 4 | FH3395 | CFA2 | 24,878,538 | 0.104 | 0.0162 |
| 4 | FH2388 | CFA3 | 44,745,542 | 0.048 | 0.0022 |
| 4 | FH2320 | CFA3 | 44,880,174 | 0.049 | 0.0094 |
| 4 | FH3337 | CFA22 | 58,232,711 | 0.051 | 0.0036 |
| 4 | FH2538 | CFA22 | 60,047,493 | 0.043 | 0.0065 |
| 4
|
FH2323
|
CFA36
|
11,380,453
|
0.040
|
0.0001
|
-
All markers significantly associated with PC2 and PC4 are listed along with the physical position of the marker, the amount of variation explained by the marker, and the P-value for each association. P-values are based on allele sharing tests (Methods) and adjusted for the number of trials in the genome scan (e.g., 700). Possible candidate genes are listed in a supplemental table (Table 3b) online.
