Table 1.
Summary of current genomic resources on fish species
|
|
Genome projects |
Genome size (Mb) |
Assembled genome sequence coverage |
Shotgun reads |
ESTs or cDNAs |
|---|---|---|---|---|---|
| Zebrafish | http://www.sanger.ac.uk/Projects/D_rerio/ | 1700 | 6.5–7 | 24,535,919 | 673078 |
| Tetraodon | http/www.genoscope.cns.fr/tetraodon | 350 | 8.3 | 2,975,798 | 99204a |
| Fugu | http://genome.jgi-psf.org/Takru4/Takru4.home.html | 380 | 8.7 | 3,638,510 | 25860 |
| Medaka | http://dolphin.lab.nig.ac.jp/medaka/ | 800 | 9.0 | 15,171,833 | — |
| Salmon | http://www.salmongenome.no | 3100 | — | 22,677 | 114911 |
| Stickleback | http://www.genome.gov/12512292 | 675 | — | 6,959,213 | 171001 |
| Trout
|
N.A.
|
2700
|
—
|
47,051
|
231820
|
-
N.A.: Not available.
-
↵a Tetraodon cDNA sequences are full-length insert sequences; sequences from other species are ESTs
