Table 1.
Pairwise identities between BAC clones
|
|
LCR22-2 |
LCR22-4 |
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
AC008079 |
AC007981 |
AC008132 |
AC007325 |
AC008103 |
AC008018 |
AP000550 |
AC009288 |
AP000551 |
AP000552 |
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| AC008079 | — | — | — | — | — | — | — | — | — | |||||||||
| AC007981 | 99.53 | 99.45 | 99.52 | 99.38 | 99.38 | 99.53 | 99.64 | 99.38 | ||||||||||
| AC008132 | 99.51 | 99.4 | 99.41 | 99.36 | 99.55 | 99.54 | 99.41 | |||||||||||
| AC007325 | 99.02 | 99.54 | 99.55 | 99.31 | 99.66 | 99.13 | ||||||||||||
| AC008103 | — | — | 99.28 | — | 99.23 | |||||||||||||
| AC008018 | 99.69 | 99.82 | 99.8 | 99.63 | ||||||||||||||
| AP000550 | 99.79 | 99.83 | — | |||||||||||||||
| AC009288 | 99.75 | 99.54 | ||||||||||||||||
| AP000551 | 99.47 | |||||||||||||||||
| AP000552
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The table shows pairwise nucleotide identities between LCR22-2/LCR22-4 clones. All positions found in AT-rich palindromes were excluded from the comparison to avoid possible alignment artifacts. We also excluded the first 20 kb, since AC008018 and AP000550 are essentially identical in this segment.
