Table 2.
HapMap single-locus FST values for each population and over all populations
|
Chromosome |
CEU |
YRI |
HCB |
JPT |
All |
|---|---|---|---|---|---|
| 1 | .09 (.35,.04) | .12 (.41,.03) | .15 (.32,.04) | .15 (.32,.04) | .13 (.12,.02) |
| 2 | .11 (.35,.04) | .11 (.41,.04) | .16 (.31,.05) | .17 (.32,.05) | .14 (.12,.02) |
| 3 | .10 (.34,.04) | .11 (.40,.03) | .17 (.31,.04) | .17 (.31,.04) | .13 (.12,.02) |
| 4 | .11 (.34,.04) | .10 (.41,.03) | .15 (.30,.04) | .15 (.31,.04) | .13 (.12,.02) |
| 5 | .09 (.34,.04) | .13 (.39,.03) | .14 (.31,.05) | .15 (.31,.05) | .12 (.12,.02) |
| 6 | .09 (.35,.03) | .13 (.41,.03) | .14 (.31,.03) | .14 (.31,.03) | .12 (.11,.02) |
| 7 | .09 (.35,.04) | .11 (.40,.03) | .14 (.30,.04) | .15 (.32,.05) | .12 (.12,.02) |
| 8 | .10 (.33,.04) | .14 (.40,.04) | .14 (.30,.04) | .14 (.30,.04) | .13 (.12,.02) |
| 9 | .09 (.34,.03) | .11 (.40,.03) | .15 (.30,.03) | .15 (.31,.03) | .12 (.11,.02) |
| 10 | .11 (.35,.04) | .12 (.40,.03) | .14 (.31,.04) | .14 (.31,.03) | .13 (.12,.02) |
| 11 | .10 (.34,.04) | .13 (.39,.03) | .13 (.30,.03) | .12 (.30,.03) | .12 (.11,.02) |
| 12 | .09 (.36,.04) | .12 (.40,.03) | .15 (.32,.04) | .15 (.32,.04) | .13 (.12,.02) |
| 13 | .10 (.33,.03) | .11 (.40,.03) | .14 (.30,.04) | .14 (.30,.04) | .12 (.11,.02) |
| 14 | .12 (.36,.05) | .13 (.40,.02) | .13 (.30,.03) | .13 (.31,.03) | .13 (.11,.02) |
| 15 | .14 (.37,.05) | .12 (.41,.03) | .15 (.31,.05) | .15 (.32,.05) | .14 (.13,.02) |
| 16 | .10 (.35,.03) | .13 (.40,.02) | .14 (.31,.03) | .15 (.30,.03) | .13 (.11,.02) |
| 17 | .10 (.33,.04) | .14 (.40,.04) | .15 (.30,.05) | .15 (.31,.04) | .13 (.13,.03) |
| 18 | .10 (.34,.03) | .09 (.39,.03) | .14 (.29,.03) | .14 (.31,.03) | .12 (.10,.01) |
| 19 | .11 (.35,.02) | .12 (.42,.02) | .12 (.31,.02) | .14 (.32,.03) | .12 (.11,.01) |
| 20 | .09 (.33,.03) | .14 (.39,.02) | .13 (.30,.03) | .14 (.30,.04) | .12 (.11,.02) |
| 21 | .09 (.33,.03) | .13 (.39,.02) | .13 (.29,.02) | .12 (.30,.03) | .12 (.11,.01) |
| 22
|
.08 (.33,.02)
|
.15 (.40,.03)
|
.14 (.31,.03)
|
.14 (.31,.03)
|
.12 (.12,.02)
|
| All
|
.10 (.35,.04)
|
.12 (.40,.03)
|
.15 (.31,.04)
|
.15 (.31,.04)
|
.13 (.12,.02)
|
-
FST values are averaged over each chromosome. Shown in parentheses are standard deviations over each chromosome for single-SNP values and for 5-Mb window values.
(CEU) Caucasians of European descent; (YRI) Yoruba from Ibadan, Nigeria; (HCB) Han Chinese from Beijing; (JPT) Japanese from Tokyo.
