Genomic features of the studied plants
|
Monocots |
Genome size (Mbp)a |
Sub-genome size (Mbp) |
Ploidy level |
Percent protein database matches |
Relative gene densityb |
Gene number per sub-genome |
Genes per genome |
|---|---|---|---|---|---|---|---|
| Rice | 400 | 400 | 2× | 8.39 | 1 | NA | 41,000 |
| Sorghum | 750 | 750 | 2× | 3.64 | 0.43 | NA | 33,400 |
| Maize | 2670 | 2670 | 2× | 1.23 | 0.15 | NA | 40,300 |
| Wild wheat | 4000 | 4000 | 2× | 0.67 | 0.08 | NA | 32,800 |
| Barley | 5400 | 5400 | 2× | 0.51 | 0.06 | NA | 33,600 |
| Bread wheat | 16,800 | 5600 | 6× | 1.44 | 0.17 | 98,640 | 295,900 |
| Dicots
|
|
|
|
|
|
|
|
| Arabidopsis | 135 | 135 | 2× | 22.22 | 1 | NA | 26,300 |
| Soybean | 1100 | 550 | 4× | 6.03 | 0.27 | 29,110 | 58,200 |
| Oilseed rape | 1100 | 550 | 4× | 6.78 | 0.30 | 32,720 | 65,400 |
| Cabbage | 760 | 760 | 2× | 8.49 | 0.38 | NA | 56,600 |
| Potato | 2000 | 1000 | 4× | 4.27 | 0.19 | 37,450 | 74,900 |
| Tomato | 1000 | 1000 | 2× | 2.84 | 0.13 | NA | 24,900 |
| Cotton | 3000 | 1500 | 4× | 4.07 | 0.18 | 53,550 | 107,100 |
| Non-Angiosperms
|
|
|
|
|
|
|
|
| Moss | 380 | 380 | 2× | 4.44 | 0.53 | NA | 20,600 |
| Fern | 9000 | 9000 | 2× | 0.49 | 0.06 | NA | 42,300 |
| Pine
|
21,600
|
21,600
|
2×
|
0.85
|
0.10
|
NA
|
224,300
|
-
↵a Genome sizes were taken from the Plant DNA C-values Database, Royal Botanic Gardens, Kew, UK (http://www.rbgkew.org.uk/cva1/database1.html), except for wild wheat (Li et al. 2004), fern (J. Banks, pers. comm.), Arabidopsis (http://www.arabidopsis.org; Round et al. 1997), and rice (http://www.rgp.dna.affrc.go.jp/cgi-bin/statusdb/irgsp-status.cgi). (NA) not applicable
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↵b The relative gene density per genome or sub-genome was calculated relative to rice in monocots and non-angiosperms, and relative to Arabidopsis in dicots











