Table 2.
fsORF with more than 5% of -1 frameshifting
|
fsORF |
Level |
Heptamer |
Sage |
Overlap |
Size (aa) |
ORF0 |
ORF-1 |
Notes |
|---|---|---|---|---|---|---|---|---|
| 2 | 6% ± 1 | AAAAAAA | Low | 34 | 332 | SCO2 | SCO2 (involved in stability of Cox1p and Cox2p) | |
| 12 | 11% ± 1 | CCCAAAG | Low | 64 | 698 | YDL038C* | PRM7 | PRM7 (pheromone-regulated membrane protein) |
| EC3.2.1.-: Glycosidases | ||||||||
| 19e | 9% ± 1 | - | 145 | 389 | AAD6 | AAD16* | AAD6 (high similarity with the AAD of P. chrysosporium) | |
| EC1.1.1.91: Aryl-alcohol dehydrogenase (NADP+) | ||||||||
| 24 | 13% ± 1 | UUUUUUU | - | 88 | 143 | Intergenic | ||
| 33 | 12% ± 1 | Medium | 40 | 236 | YKL033W-A* | - | ||
| 35 | 7% ± 1 | High | 46 | 246 | SRL3 | SRL3 (Suppressor of Rad53 null Lethality) | ||
| 43e | 5% ± 1 | - | 43 | 720 | YWR084W* | YMR085W* | Putative glutamine-fructose-6-phosphate transaminase | |
| EC2.6.1.16: Glutamine-fructose-6-phosphate transaminase (isomerising) | ||||||||
| 44 | 5% ± 1 | Low | 121 | 635 | ADE17 | ADE17 (AICAR transformylase/IMP cyclohydrolase)-Purine metabolism | ||
| EC2.1.2.3: Phosphoribosylaminoimidazolecarboxamide formyltransferase | ||||||||
| EC3.5.4.10: IMP cyclohydrolase | ||||||||
| 46 | 10% ± 1 | - | 28 | 330 | MRPL24 | MRPL24 (Mitochondrial ribosomal protein) | ||
| 51 | 7% ± 1 | Low | 49 | 421 | RAD17 | RAD17 (DNA damage checkpoint control protein) | ||
| 52
|
5% ± 1
|
|
Low
|
199
|
433
|
STE4
|
|
STE4 (GTP-binding protein beta subunit of the pheromone pathway)
|
