Parallel adaptive evolution cultures of Escherichia coli lead to convergent growth phenotypes with different gene expression states

Table 1.

Genes showing statistically significant differential expression during evolution (endpoint vs. day 1) in at least 6 of 7 evolved populations


Gene category

Lactate

Glycerol




Hypothetical/putative None b0329, b1045, b1141,
b1266, b1471, b1566,
b1678, b1784, b1836,
b1934, b2086, b2263,
b2302, b2327, b2742,
b3021, b3293, b4078,
b4109,
Annotated ppsA, yihK proM, metU, metT,
alaX, alaW, mltA,
murA, thrV, trpS,
prfC, flgN, mraY,
psiF, wrbA, msyB,
rpsV, sodC, ptrB,
motA, otsB, fliS,
fbaB, yehV, tktB,
ptsN, yjhH, aceB,
kdpE, flgM, flgA,
flgC, flgD, flgF,
flgK, ycfN, ycgR,
narX, cheZ, cheY,
cheB, cheR, tar,
cheW, cheA, motB,
fliZ, fliA, fliC,


fliD,
fliL,
menF

This Article

  1. Genome Res. 15: 1365-1372

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