Table 1.
General features of the Pseudoalteromonas haloplanktis genome
|
|
Chromosome 1 |
Chromosome 2 |
|---|---|---|
| Size (bp) | 3,214,944 | 635,328 |
| G+C percentage | 41.0 | 39.3 |
| Number of predicted CDSs | 2942 | 546 |
| Average size of CDSs (bp) | 950 | 1013 |
| Percentage coding | 88.6 | 87.3 |
| Number of rRNA operons (16S-23S-5S) | 9 | 0 |
| 5S rRNA (extra copies) | 1 | 0 |
| Number of tRNAs | 106 | 0 |
| CDSs similar to known proteins | 1123 | 157 |
| Putative functions (limited homology/structural features) | 759 | 251 |
| Conserved hypothetical proteins | 694 | 75 |
| Orphan proteins | 325 | 61 |
| Doubtful CDS and gene remnant
|
41
|
2
|
