Table 6.
Estimated proportion of microrearrangements on each edge of the tree
|
|
Gene-based |
Sequence-based |
||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Run
|
gene4
|
gene7
|
gene10
|
gene20
|
100K
|
200K
|
300K
|
|||||
| MA–chicken | 0.60 | 0.60 | 0.63 | 0.64 | 0.65 | 0.61 | 0.58 | |||||
| RA–mouse | 0.03 | 0.03 | 0.03 | 0.04 | 0.10 | 0.08 | 0.09 | |||||
| RA–rat | 0.23 | 0.22 | 0.20 | 0.17 | 0.14 | 0.18 | 0.20 | |||||
| MA–RA | 0.04 | 0.05 | 0.06 | 0.05 | 0.09 | 0.09 | 0.09 | |||||
| MA–human
|
0.09
|
0.10
|
0.10
|
0.10
|
0.03
|
0.3
|
0.03
|
|||||
-
Scenarios were obtained by applying MGR independently to genes/anchors within synteny blocks and imposing the proper topology shown at the top of Figure 2. Columns do not always add up to 1 because of rounding.
