Structural and functional analysis of a 0.5-Mb chicken region orthologous to the imprinted mammalian Ascl2/Mash2–Igf2–H19 region

Table 1.

DNA polymorphisms


Gene

Location

Polymorphism (positiona)

Line or breedb
PHEMX/TSSC6 Exon 4 A→G (11,747) BPR, WL-D, WL-G, WL-HA
Exon 3′ T→C (21,082) BPR, WL-HA
C→T (21,098) OS
ASCL2/CASH4 Exon 1 C→T (29,316) BPR, WL-Cornell-P, WL-G
A→G (29,365) BPR, WL-Cornell-P, WL-G
C→T (29,406) BPR, WL-Cornell-P, WL-G
G→A (29,429) BPR, OS
A→G (29,450) BPR, OS, WL-Cornell-P, WL-G
C→T (29,534) BPR, WL-G
T→C (29,563) BPR, WL-Cornell-P, WL-G
T→C (29,570) BPR, OS
TH Exon 13 C→T (86,656) BPR
G→T (86,744) BPR, OS
G→A (86,848) WL-Cornell-P
INS Exon 2 C→T (106,014) OS
G→A (106,015) BPR, WL-Cornell-P, WL-HA


G→T (106,047)
OS
  • a The nucleotide position number is according to AP003796

  • b (BRP), Barred Plymouth Rock; (OS), Oh-Shamo; (WL-Cornell-P), Cornell-P line of White Leghorn; (WL-D), D line of White Leghorn; (WL-G) G line of White Leghorn; (WL-HA), HA line of White Leghorn

This Article

  1. Genome Res. 15: 154-165

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