An Efficient SNP System for Mouse Genome Scanning and Elucidating Strain Relationships

Table 2.

Distribution of Informative Markers in All Possible Crosses of 22 Mouse Strains


Strain

129S1/SvlmJ

A/J

AKR/J

BALB/cByJ

BTBR T+tflJ

BUB BnJ

C3H/HeJ

C57BL/6J

CAST/EiJ

CBA/J

DBA/2J

FVB/NJ

JF1/Ms

KK/HIJ

MRL/MpJ

NOD/LtJ

NZW/LacJ

PL/J

PWK/PhJ

SJL/J

SPRET/EiJ

WSB/EiJ
129S1/SvlmJ
A/J 785
AKR/J 778 469
BALB/cByJ 816 363 526
BTBR T+ tflJ 534 623 622 694
BUB/BnJ 730 513 425 562 646
C3H/HeJ 818 400 519 525 706 530
C57BL/6J 1047 882 786 880 747 747 981
CAST/EiJ 747 710 674 713 707 687 749 769
CBA/J 798 455 518 533 675 522 205 902 696
DBA/2J 744 576 569 631 660 570 479 825 702 456
FVB/NJ 729 495 480 567 604 430 558 760 678 526 574
JF1/Ms 774 774 775 790 778 775 808 772 286 765 744 791
KK/HIJ 639 624 590 676 601 560 680 711 684 637 579 539 703
MRL/MpJ 754 434 352 530 681 472 432 833 716 463 550 532 784 613
NOD/LtJ 731 493 471 552 612 405 590 736 697 582 551 412 777 564 520
NZW/LacJ 582 606 567 649 584 529 658 688 670 609 554 525 715 468 575 540
PL/J 712 475 396 511 626 470 518 810 697 527 575 514 770 577 427 502 557
PWK/PhJ 762 734 742 730 739 736 764 782 300 720 710 748 142 697 755 754 691 735
SJL/J 660 487 472 510 592 387 525 734 648 501 547 328 738 523 467 414 477 452 699
SPRET/EiJ 627 630 598 649 630 605 649 703 249 617 616 594 300 595 602 609 567 586 291 571
WSB/EiJ
722
634
610
653
656
610
671
730
552
630
661
584
662
619
624
614
588
621
633
550
486

This Article

  1. Genome Res. 14: 1806-1811

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