EGPred: Prediction of Eukaryotic Genes Using Ab Initio Methods After Combining With Sequence Similarity Approaches

Table 5.

Comparison of Predictions on Human Chromosome 13 Using EGPred With Available Public Domain Annotation




Total predicted exons

Available annotated exons

Both ends match

One end matches

Overlap match

Novel exons
Genscan (+) strand 6712 2800 996 198 18 5500
Genscan (−) strand 6831 2905 1086 187 42 5516
HMMgene (+) strand 8372 2800 674 244 21 7433
HMMgene (−) strand
8206
2905
724
239
59
7184

This Article

  1. Genome Res. 14: 1756-1766

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