Table 1.
Taxonomic Lineages of cpnDB Sequence Records and Numbers of Records and Genera
|
Lineage |
No. of records |
No. of genera |
|---|---|---|
| TYPE I CHAPERONIN | ||
| Archaea; Euryarachaeota | 2 | 1 |
| Bacteria; Actinobacteria | 130 | 16 |
| Bacteria; Aquificae | 1 | 1 |
| Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes | 25 | 11 |
| Bacteria; Bacteroidetes/Chlorobi group; Chlorobi | 1 | 1 |
| Bacteria; Chlamydiae/Verrucomicrobia group; Chlamydiae | 27 | 3 |
| Bacteria; Cyanobacteria | 22 | 8 |
| Bacteria; Deinococcus-Thermus | 2 | 2 |
| Bacteria; Fibrobacteres/Acidobacteria group | 1 | 1 |
| Bacteria; Firmicutes; Bacilli | 340 | 22 |
| Bacteria; Firmicutes; Clostridia | 22 | 9 |
| Bacteria; Firmicutes; Mollicutes | 11 | 3 |
| Bacteria; Fusobacteria | 3 | 1 |
| Bacteria; Planetomycetes | 1 | 1 |
| Bacteria; Proteobacteria; Alphaproteobacteria | 187 | 28 |
| Bacteria; Proteobacteria; Betaproteobacteria | 39 | 15 |
| Bacteria; Proteobacteria; delta/epsilon subdivisions | 60 | 8 |
| Bacteria; Proteobacteria; Gammaproteobacteria | 264 | 50 |
| Bacteria; Spirochaetes | 8 | 3 |
| Bacteria; Thermotogae | 2 | 1 |
| Eukaryota; Alveolata | 9 | 4 |
| Eukaryota; Cryptophyta | 2 | 2 |
| Eukaryota; Diplomonadida group | 2 | 2 |
| Eukaryota; Entamoebidae | 5 | 1 |
| Eukaryota; Euglenozoa | 7 | 3 |
| Eukaryota; Fungi/Metazoa group; Fungi | 12 | 10 |
| Eukaryota; Fungi/Metazoa group; Metazoa | 29 | 22 |
| Eukaryota; Viridiplantae | 29 | 11 |
| Eukaryota; Rhodophyta | 4 | 3 |
| Eukaryota; Others | 7 | 6 |
| Various (clones from microbial ecology studies) | 595 | n/a |
| TYPE II CHAPERONIN | ||
| Archaea; Crenarchaeota | 20 | 6 |
| Archaea; Euryarchaeota | 44 | 12 |
| Archaea; Nanoarchaeota
|
1
|
1
|
