Clustering of DNA Sequences in Human Promoters

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Table 4.

Functional Properties of Consensus Sequences Outside of the Peak

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Table 4.

  • The genes with promoters that contain the ETS, NRF-1, Clus1, and TATA are divided into two groups, those in which the consensus sequence is in the peak, and those in which the consensus sequence is not in the peak. The same set of parameters as for Table 3 for each functional criteria and consensus sequence is presented. For example, 124 of the 850 housekeeping genes contain the ETS sequence in the peak. This is 2.0 times more than the expected frequency: (124/850)/(1072/13,010). Those correlations that are greater than P = 3 are shown in black, a positive correlation has an asterisk in the probability column.

This Article

  1. Published in Advance July 15, 2004, doi: 10.1101/gr.1953904 Genome Res. 14: 1562-1574

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