The Number of Octopus ESTs Obtained in This Study
|
|
No. of ESTs |
||
|---|---|---|---|
| Categories |
In whole eyea |
In all librariesb |
|
| Total clonesc | 9489 | 16,432 | |
| Usable clonesd | 5273 | 9448 | |
| Nonredundant sequencese | 1509 | 2824 | |
| Not matched to any protein | 898 | 1772 | |
| Matched to protein | 611 | 1052i | |
| Function knownf | 454h | 691 | |
| Function unknowng
|
157
|
361
|
|
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A summary of cDNA libraries and EST assembly of Octopus eye.
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↵a The number of ESTs sequenced from cDNA library A (whole eye).
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↵b The number of ESTs sequenced from both cDNA library A (whole eye) and cDNA library B (eyeball without lens).
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↵c Total number of clones that have been sequenced and reported in this paper.
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↵d The number of clones obtained after vector-sequence elimination and quality check.
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↵e The number of nonredundant sequences.
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↵f The function “known” represents those sequences that match to some proteins in the nonredundant protein database.
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↵g The function “unknown” represents those sequences that do not match to any protein in the nonredundant protein database.
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↵h Indicates the genes that were used in the analysis of the functional categorization.
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↵i Indicates the genes that were used in all analyses in this study except for the functional categorization.
