Summary of Results for RH Markers on the Stanford Radiation Hybrid Map (Panel G3)
|
BAC clone |
UCSC July 2003 position (bp) |
RH marker |
Number of clones in G3 panel |
Retention rate (%) |
Duplication detected/not detected |
|---|---|---|---|---|---|
| AC069007.3 | chr17:44,081,749-44,286,700 | RH32232 | 37 | 44.6 | Dup |
| RH42841 | 20 | 24.1 | Dup | ||
| AC003663.1 | chr17:63,238,604-63,370,672 | D17S1557* | 17 | 20.5 | Dup |
| RH42841 | 20 | 24.1 | Dup | ||
| RH14914 | 10 | 12 | Non-dup | ||
| RH42755 | 18 | 21.7 | Dup | ||
| AC074102.2 | chr17:58,210,816-58,381,497 | RH37851 | 12 | 14.5 | Non-dup |
| AC037475.9 | chr17:58,899,542-59,015,469 | RH110597* | 11 | 13.3 | Non-dup |
| AC025048.5 | chr17:58,602,379-58,740,299 | RH38146 | 12 | 14.5 | Non-dup |
| RH84338 | 10 | 12 | Non-dup | ||
| RH94909 | 33 | 39.8 | Dupa | ||
| AC004686.1 | chr17:58,373,575-58,507,051 | RH9059 | 24 | 28.9 | Dup |
| RH31407 | 11 | 13.3 | Non-dup | ||
| RH14802 | 9 | 10.8 | Non-dup | ||
| RH83863 | 10 | 12 | Non-dup | ||
| AC005702.1 | chr17:58,470,068-58,617,753 | RH74575 | 9 | 10.8 | Non-dup |
| RH9059 | 24 | 28.9 | Dup | ||
| AC080038.3 | chr17:61,048,819-61,267,940 | RH32867 | 14 | 16.9 | Dupb |
|
|
|
RH99431
|
18
|
21.7
|
Dupb
|
-
Results of RH markers on the Stanford Radiation Hybrid map. All markers were analyzed in silico, but those indicated with * have been experimentally confirmed by PCR. An additional 27 microsatellite markers used in our fine-mapping experiment were also analyzed both in silico and by PCR on the Radiation Hybrid Panel G3, and the results were comparable to the ones shown here.
-
↵a Not in a duplicon, but the EST sequence maps with >90% identity to five separate locations on Chromosome 17.
-
↵b Not in a duplicon, but RH markers map to both Chromosomes 7 and 17.
