Table 6.
Lateral Transfer Candidates
|
Accession |
Gene name |
Function |
Closest homolog in |
BLAST E-value |
% GCa |
CAIb |
Comment |
|---|---|---|---|---|---|---|---|
| MMOB0940 | MMOB0940 | Conserved hypothetical protein | Helicobacter pylori | 1 × 10-15 | 24% | 0.654 | |
| MMOB0950 | MMOB0950 | Putative type II DNA methylase protein | Chlorella virus NY2A | 2 × 10-19 | 24% | 0.659 | Also strong homologs in H. pylori |
| MMOB4460 | arsR | Arsenical resistance operon repressor family protein | Dechloromonas aromatica | 6 × 10-6 | 25% | 0.661 | Stop codon is TGA in Dechloromonas ortholog, translated as Trp in M. mobile |
| MMOB5030 | MMOB5030 | Expressed protein of unknown function | Pirellula sp. | 9 × 10-32 | 24% | 0.678 | Pirellula is an aquatic bacterium |
| MMOB5780 | bioF | 8-Amino-7-oxononanoate synthase (or related protein) | Enterococcus faecium | 1 × 10-153 | 30% | 0.689 | See text |
| MMOB5790 | wcaG | NAD-dependent nucleoside-diphosphate-sugar epimerase | E. faecium | 1 × 10-129 | 30% | 0.717 | See text |
| MMOB5850 | MMOB5850 | Conserved hypothetical protein | Rickettsia rickettsii | 3 × 10-15 | 19% | 0.739 | Has some homologs in Gram-positive (including M. penetrans) but best hits are in Gram-negative |
| MMOB5990 | MMOB5990 | Hypothetical protein | Ferroplasma acidarmanus | 8 × 10-12 | 24% | 0.668 | F. acidarmanus is an archaeon |
| MMOB6010
|
udgA
|
UDP-glucose dehydrogenase
|
Environmental sequence
|
5 × 10-34
|
25%
|
0.781
|
Best named species hit is Mycobacterium avium, also hits in archaea
|
