Figure 2
Genome features and proteogenomic map. (First row) Genome ruler. (Second row) Special genome features including tRNAs (orange), mvsp genes (blue), and other features labeled on the figure. (Third row) Coding DNA sequences (CDS), color coded by COG categories automatically assigned for proteins in COGs, or manually assigned as necessary (color key in lower right corner). CDS not validated by proteomics are marked by an *. (Fourth row) Proteogenomic map showing detected peptides covering the predicted proteins color coded by reading frame, as in Figure 1.
