Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements

Table 1.

The Published Genome Sequences of These Nine Enterobacteria Are a Target for the Alignment System Presented Here


Species

Genome size

Reference
E. coli K12 MG1655 4,639,221 Blattner et al. 1997
E. coli O157:H7 EDL933 5,524,971 Perna et al. 2001
E. coli O157:H7 VT-2 Sakai 5,498,450 Hayashi et al. 2001
E. coli CFT073 5,231,428 Welch et al. 2002
S. flexneri 2A 2457T 4,599,354 Wei et al. 2003
S. flexneri 2A 4,607,203 Jin et al. 2002
S. enterica Typhimurium LT2 4,857,432 McClelland et al. 2001
S. enterica Typhi CT18 4,809,037 Parkhill et al. 2001
S. enterica Typhi Ty2
4,791,961
Deng et al. 2003
  • Numerous large-scale evolutionary events such as horizontal transfer and rearrangement are scattered throughout their genomes.

This Article

  1. Genome Res. 14: 1394-1403

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