Table 2.
Number and Percentage of Microsatellites, Block Length, and Percentage of Markers Misplaced for the 7634 Marshfield and 5093 deCODE Markers With Unambiguously Determined Physical Positions Whose Marker Order (See Text) Does Not Correspond to the Order Based on the Sequencing Data (UCSC Assembly July 2003; NCBI Build 34)
|
|
Marshfield |
deCODE |
||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Markers misspecified |
Block length |
Misplaced |
Markers misspecified |
Block length |
Misplaced |
|||||||||||||||||
| Chromosome |
No. |
(%) |
Mean |
Max. |
% > 2 cM |
%>5 cM |
(no.) |
(%) |
Mean |
Max. |
%>2 cM |
%>5 cM |
||||||||||
| 1 | 231 | 36.61 | 2.27 | 10.49 | 4.75 | 0.16 | 4 | 0.88 | 1.19 | 2.25 | 0.00 | 0.00 | ||||||||||
| 2 | 254 | 41.17 | 2.97 | 17.13 | 4.21 | 0.81 | 18 | 4.43 | 4.57 | 10.67 | 0.25 | 0.00 | ||||||||||
| 3 | 196 | 37.98 | 2.03 | 7.87 | 4.07 | 0.58 | 46 | 12.50 | 1.18 | 2.87 | 0.00 | 0.00 | ||||||||||
| 4 | 199 | 45.43 | 2.97 | 8.03 | 5.71 | 0.23 | 5 | 1.67 | 1.28 | 1.72 | 0.00 | 0.00 | ||||||||||
| 5 | 209 | 45.83 | 2.39 | 7.13 | 4.82 | 0.00 | 119 | 35.95 | 14.95 | 28.44 | 12.08 | 0.30 | ||||||||||
| 6 | 192 | 43.34 | 2.50 | 8.32 | 6.55 | 0.23 | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||||||||||
| 7 | 219 | 54.48 | 3.13 | 10.71 | 13.68 | 3.48 | 68 | 27.98 | 11.15 | 36.23 | 15.23 | 7.82 | ||||||||||
| 8 | 179 | 46.74 | 2.98 | 23.54 | 3.39 | 0.26 | 17 | 6.88 | 2.47 | 4.06 | 1.21 | 0.00 | ||||||||||
| 9 | 147 | 52.13 | 4.39 | 11.14 | 10.28 | 2.48 | 6 | 3.16 | 1.54 | 2.98 | 0.00 | 0.00 | ||||||||||
| 10 | 211 | 51.72 | 2.92 | 8.87 | 6.86 | 1.23 | 2 | 0.79 | 2.39 | 2.39 | 0.00 | 0.00 | ||||||||||
| 11 | 199 | 51.69 | 2.98 | 10.67 | 3.64 | 0.78 | 4 | 1.54 | 2.61 | 3.93 | 0.00 | 0.00 | ||||||||||
| 12 | 168 | 45.53 | 3.04 | 11.51 | 7.32 | 1.08 | 2 | 0.84 | 0.94 | 0.94 | 0.00 | 0.00 | ||||||||||
| 13 | 80 | 32.79 | 2.56 | 6.99 | 3.28 | 0.82 | 2 | 1.14 | 3.00 | 3.00 | 0.00 | 0.00 | ||||||||||
| 14 | 96 | 39.02 | 2.97 | 10.71 | 5.28 | 2.03 | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||||||||||
| 15 | 78 | 38.42 | 2.92 | 6.71 | 5.42 | 0.00 | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||||||||||
| 16 | 149 | 59.13 | 3.54 | 26.55 | 16.27 | 11.11 | 8 | 5.33 | 2.00 | 3.17 | 0.00 | 0.00 | ||||||||||
| 17 | 204 | 71.33 | 6.06 | 27.18 | 26.92 | 11.89 | 4 | 2.23 | 0.44 | 0.52 | 0.00 | 0.00 | ||||||||||
| 18 | 88 | 41.90 | 2.83 | 9.63 | 6.67 | 2.38 | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||||||||||
| 19 | 83 | 39.52 | 2.59 | 7.94 | 2.38 | 0.48 | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||||||||||
| 20 | 86 | 41.55 | 4.04 | 11.59 | 6.28 | 1.93 | 2 | 1.42 | 0.28 | 0.28 | 0.00 | 0.00 | ||||||||||
| 21 | 69 | 65.09 | 3.32 | 6.28 | 12.26 | 2.83 | 3 | 4.48 | 3.39 | 4.86 | 2.99 | 2.99 | ||||||||||
| 22 | 51 | 53.13 | 3.52 | 10.56 | 10.42 | 1.04 | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | ||||||||||
| X | 79 | 32.38 | 4.52 | 8.77 | 11.07 | 2.87 | 10 | 5.68 | 3.20 | 8.32 | 2.84 | 2.84 | ||||||||||
| Total
|
3467
|
45.42
|
3.19
|
11.67
|
7.22
|
1.77
|
320
|
6.28
|
2.46
|
5.07
|
1.73
|
0.53
|
||||||||||
