eShadow: A Tool for Comparing Closely Related Sequences

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Figure 2
Figure 2

Predicting exons in multiple primate alignments. eShadow exon prediction and conservation plots for ApoB (1.4 kb) (A), Plasminogen (1.2 kb) (B), LXR-α (1.35 kb) (C), and CETP (1 kb) (D) loci using multiple primate alignments. HMMI predictions (0.85/0.77/0.1) are in beige and DT regions (15/100) are in green. The locations of known exons are depicted as red bars. Sequences are available at NCBI (accession nos. AY190030–AY190042, AY192729–AY192785).

This Article

  1. Genome Res. 14: 1191-1198

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