A Plasmodium Gene Family Encoding Maurer's Cleft Membrane Proteins: Structural Properties and Expression Profiling

Table 1.

Plasmodium Subtelomeric Multigene Family Encoding 2-Transmembrane Proteins: Structural Properties


Namea

Locusb

Chrc

Locd

Exons

SubCe

Length

MW

pI

SPf

TMg

S1g

E1g

S2g

SE2g

Looph
PfMC-2TM_1.2 PFA0680c* 1 ST 2 MC 229 26899.8 9.69 1 2 157 179 184 203 4
PfMC-2TM_1.1 PFA0065w* 1 ST 2 MC 234 27446.4 9.66 1 2 160 182 186 208 3
PfMC-2TM_2.2 PFB0985c 2 ST 2 MC 229 27063.0 9.57 1 2 156 178 182 204 3
PfMC-2TM_2.1 PFB0960c* 2 ST 2 MC 225 26752.6 9.52 1 2 157 179 184 203 4
PfMC-2TM_3 PFC1080c 3 ST 2 MC 231 27004.6 9.47 1 2 162 184 189 208 4
PfMC-2TM_6 MAL6P1.15* 6 ST 2 MC 231 27183.1 9.60 1 2 157 179 183 205 3
PfMC-2TM_7.1 MAL7P1.5 7 ST 2 MC 235 27557.2 9.57 1 2 162 184 188 210 3
PfMC-2TM_7.2 MAL7P1.58 7 2 231 27329.0 9.55 1 2 159 181 186 208 4
PfMC-2TM_10 PF10_0390* 10 ST 2 MC 230 27217.9 9.55 1 2 153 175 185 204 9
PfMC-2TM_11.2 PF11_0025 11 ST 2 MC 231 27194.1 9.57 1 2 157 179 184 206 4
PfMC-2TM_11.1
PF11_0014*
11
ST
2
MC
231
27179.8
9.29
1
2
162
184
189
208
4
  • Protein names a are proposed based on known subcellular localization e. Genes b, which were modified from their published annotation (Gardner et al. 2002), are marked with an asterisk. The gene locations within chromosomes c are reported in d. The presence of a signal peptide (SP)f, as predicted by SignalP (Nielsen et al. 1997), and the number of transmembrane domains (TM)g, as predicted by TMHMM (Krogh et al. 2001) are reported, as well as the position of these TM segments within the protein sequenceg and the number of amino acid residues separating the two TMsh.

This Article

  1. Genome Res. 14: 1052-1059

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