The Ensembl Analysis Pipeline

Table 2.

Principal Analyses of the Human Genome Protein Annotation


Analysis

Description

Input chunk size
Pfam Interpro component 100 sequences
Prints Interpro component 100 sequences
ScanProsite Interpro component whole protein data set
ProfileScan Interpro component 100 sequences
Tmhmm Transmembranes 100 sequences
ncoil Coiled coils 100 sequences
sigp Signal peptide 100 sequences
Seg
Low-complexity
whole protein data set

This Article

  1. Genome Res. 14: 934-941

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